BitMagic-C++: SortCounting_JobFunctor< BV > Class Template Reference

BitMagic-C++

Functor to process job batch (task). More...

Public Types
typedef BV	bvector_type
typedef bvector_type::size_type	size_type

Public Member Functions
	SortCounting_JobFunctor (const vector_char_type &seq_vect, unsigned k_size, size_type from, size_type to, rsc_sparse_vector_u32 &kmer_counts)
	constructor
	SortCounting_JobFunctor (const SortCounting_JobFunctor &func)
void	operator() ()
	Main logic (functor).

Detailed Description

template<typename BV>
class SortCounting_JobFunctor< BV >

Functor to process job batch (task).

Examples: xsample07.cpp.

Definition at line 478 of file xsample07.cpp.

Member Typedef Documentation

◆ bvector_type

template<typename BV>

typedef BV SortCounting_JobFunctor< BV >::bvector_type

Examples: xsample07.cpp.

Definition at line 481 of file xsample07.cpp.

◆ size_type

template<typename BV>

typedef bvector_type::size_type SortCounting_JobFunctor< BV >::size_type

Examples: xsample07.cpp.

Definition at line 482 of file xsample07.cpp.

Constructor & Destructor Documentation

◆ SortCounting_JobFunctor() [1/2]

template<typename BV>

SortCounting_JobFunctor< BV >::SortCounting_JobFunctor	(	const vector_char_type &	seq_vect,
		unsigned	k_size,
		size_type	from,
		size_type	to,
		rsc_sparse_vector_u32 &	kmer_counts )

inline

constructor

Examples: xsample07.cpp.

Definition at line 486 of file xsample07.cpp.

Referenced by SortCounting_JobFunctor().

◆ SortCounting_JobFunctor() [2/2]

template<typename BV>

SortCounting_JobFunctor< BV >::SortCounting_JobFunctor ( const SortCounting_JobFunctor< BV > & func )

inline

Definition at line 495 of file xsample07.cpp.

References SortCounting_JobFunctor().

Member Function Documentation

◆ operator()()

template<typename BV>

void SortCounting_JobFunctor< BV >::operator() ( )

inline

Main logic (functor).

Examples: xsample07.cpp.

Definition at line 502 of file xsample07.cpp.

References get_DNA_code(), get_kmer_code(), sort_count(), and bm::rsc_sparse_vector< Val, SV >::sync().

The documentation for this class was generated from the following file:

xsample07.cpp