Here is a list of all struct and union fields with links to the structures/unions they belong to:

- s -

• s2u() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• s_params : bm::sv_serialization_plan_builder< SV >::task_batch
• s_params_ : bm::sv_serialization_plan_builder< SV >
• sample() : bm::random_subset< BV >
• sample_data_frame() : sample_data_frame
• sb_bc : bm::block_waves_xor_descr
• sb_bit_idx_arr_ : bm::deserializer< BV, DEC >
• sb_bookmarks_ : bm::sv_serialization_plan_builder< SV >::serialization_params
• sb_gc : bm::block_waves_xor_descr
• sb_id_array_ : bm::deseriaizer_base< DEC, BLOCK_IDX >
• sb_range_ : bm::sv_serialization_plan_builder< SV >::serialization_params
• sb_xor_bc : bm::block_waves_xor_descr
• sb_xor_gc : bm::block_waves_xor_descr
• sblock_arridx_type : bm::deserializer< BV, DEC >
• search_algo_params : bm::sparse_vector_scanner< SV, S_FACTOR >
• search_best_xor_mask() : bm::xor_scanner< BV >
• search_count_limit_ : bm::aggregator< BV >::pipeline< Opt >
• second : bm::pair< First, Second >
• seek() : bm::decoder_base
• select() : bm::bvector< Alloc >
• seq_size() : CSequenceColl
• serial_iterator_type : bm::iterator_deserializer< BV, SerialIterator >
• serial_stream_iterator() : bm::serial_stream_iterator< DEC, BLOCK_IDX >
• serialization_params() : bm::sv_serialization_plan_builder< SV >::serialization_params
• serialize() : bm::compressed_collection_serializer< CBC >, bm::serializer< BV >, bm::sparse_vector_serializer< SV >
• serializer() : bm::serializer< BV >
• serializer_type : bm::sparse_vector_serializer< SV >
• set() : bm::bvector< Alloc >, bm::bvmini< N >, bm::bvps_addr_resolver< BV >, bm::miniset< A, N >, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >, bm::sv_addr_resolver< SV >
• set2set_11_transform() : bm::set2set_11_transform< SV >
• set_allocator_pool() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::bvector< Alloc >, bm::sparse_vector< Val, BV >
• set_bit() : bm::bvector< Alloc >, bm::bvector_mini< A >
• set_bit_and() : bm::bvector< Alloc >
• set_bit_conditional() : bm::bvector< Alloc >
• set_bit_conditional_impl() : bm::bvector< Alloc >
• set_bit_no_check() : bm::bvector< Alloc >
• set_block_limit() : bm::alloc_pool< BA, PA >
• set_bookmarks() : bm::serializer< BV >, bm::sparse_vector_serializer< SV >, bm::sv_serialization_plan_builder< SV >
• set_buffer() : CSequenceColl
• set_compression_level() : bm::serializer< BV >
• set_compute_count() : bm::aggregator< BV >
• set_curr_ref_idx() : bm::serializer< BV >
• set_finalization() : bm::sparse_vector_deserializer< SV >
• set_gap_levels() : bm::bvector< Alloc >
• set_lead() : CSeqGroup
• set_metric() : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• set_new_blocks_strat() : bm::bvector< Alloc >
• set_null() : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• set_null_idx() : bm::basic_bmatrix< BV >
• set_octet() : bm::basic_bmatrix< BV >
• set_operation() : bm::aggregator< BV >
• set_optimization() : bm::aggregator< BV >
• set_optimize() : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator
• set_or_target() : bm::aggregator< BV >::pipeline< Opt >, bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >
• set_plane() : bm::sparse_vector_serial_layout< SV >
• set_pool() : bm::mem_alloc< BA, PA, APool >
• set_pos() : bm::decoder_base, bm::encoder
• set_range() : bm::bvector< Alloc >, bm::deserializer< BV, DEC >, bm::iterator_deserializer< BV, SerialIterator >
• set_range_hint() : bm::aggregator< BV >
• set_range_no_check() : bm::bvector< Alloc >
• set_ref_vector() : bm::xor_scanner< BV >
• set_ref_vectors() : bm::deserializer< BV, DEC >, bm::operation_deserializer< BV >, bm::serializer< BV >
• set_remap() : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• set_search_count_limit() : bm::aggregator< BV >::pipeline< Opt >, bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >
• set_search_mask() : bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >
• set_search_range() : bm::sparse_vector_scanner< SV, S_FACTOR >
• set_sim_model() : bm::serializer< BV >, bm::sparse_vector_serializer< SV >, bm::sv_serialization_plan_builder< SV >
• set_similarity() : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• set_sparse_cutoff() : bm::serializer< BV >
• set_stop_mode() : bm::thread_pool< QValue, Lock >
• set_substr() : bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
• set_value() : bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• set_value_no_null() : bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• set_xor_ref() : bm::sparse_vector_deserializer< SV >, bm::sparse_vector_serializer< SV >, bm::sv_serialization_plan_builder< SV >
• setup_xor_compression() : bm::sparse_vector_deserializer< SV >
• shift_left() : bm::bvector< Alloc >
• shift_right() : bm::bvector< Alloc >
• signal_mut_ : bm::queue_sync< Value, Lock >
• sim_model_ : bm::sparse_vector_serializer< SV >
• sim_model_ptr_ : bm::sparse_vector_serializer< SV >, bm::sv_serialization_plan_builder< SV >::serialization_params
• similarity() : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similarity_ : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similarity_descriptor() : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similarity_functor : bm::similarity_batch< SDESCR >, bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similarity_object_type : bm::similarity_batch< SDESCR >, bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similarity_value_type : bm::similarity_batch< SDESCR >, bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• similaruty_descriptor_type : bm::similarity_batch< SDESCR >
• size() : bm::aggregator< BV >::pipeline< Opt >, bm::alloc_pool< BA, PA >, bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::bv_ref_vector< BV >, bm::bvector< Alloc >, bm::compressed_collection< Value, BV >, bm::decoder_base, bm::encoder, bm::pointer_pool_array, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >, bm::sparse_vector_serial_layout< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >, bm::sv_sample_index< SV >, bm::task_batch< BVAlloc >, bm::task_batch_base, CSequenceColl, sparse_vect_index::vect_addr
• size_ : bm::base_sparse_vector< Val, BV, MAX_SIZE >
• size_internal() : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• size_type : bit_visitor_functor, bm::aggregator< BV >, bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::bit_vistor_copy_functor< BV >, bm::block_xor_match_descr, bm::bv_ref_vector< BV >, bm::bvector< Alloc >::bulk_insert_iterator, bm::bvector< Alloc >, bm::bvector_mini< A >, bm::bvps_addr_resolver< BV >, bm::compressed_collection< Value, BV >, bm::compute_sim_matrix_plan_builder< BV >, bm::deserializer< BV, DEC >, bm::distance_metric_descriptor, bm::interval_enumerator< BV >, bm::iterator_deserializer< BV, SerialIterator >, bm::operation_deserializer< BV >, bm::random_subset< BV >, bm::rank_compressor< BV >, bm::rsc_sparse_vector< Val, SV >::back_insert_iterator, bm::rsc_sparse_vector< Val, SV >::const_iterator, bm::rsc_sparse_vector< Val, SV >, bm::serializer< BV >, bm::set2set_11_transform< SV >, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector< Val, BV >::const_iterator, bm::sparse_vector< Val, BV >, bm::sparse_vector_deserializer< SV >, bm::sparse_vector_scanner< SV, S_FACTOR >, bm::sparse_vector_serializer< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >, bm::sv_addr_resolver< SV >, bm::sv_sample_index< SV >, bm::sv_serialization_plan_builder< SV >, bm::task_batch< BVAlloc >, bm::task_batch_base, bm::thread_pool_executor< TPool >, bm::xor_scanner< BV >, bm::xor_sim_model< BV >, Counting_JobFunctor< DNA_Scan >, SortCounting_JobFunctor< BV >
• sizet_vector_type : bm::sparse_vector_serial_layout< SV >
• skip() : bm::bvector< Alloc >::enumerator
• skip_mono_blocks() : bm::serial_stream_iterator< DEC, BLOCK_IDX >
• skip_offset_ : bm::deseriaizer_base< DEC, BLOCK_IDX >
• skip_pos_ : bm::deseriaizer_base< DEC, BLOCK_IDX >
• skip_to_rank() : bm::bvector< Alloc >::enumerator
• skip_zero_values() : bm::rsc_sparse_vector< Val, SV >::const_iterator, bm::sparse_vector< Val, BV >::const_iterator
• slice() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• slice_mask_ : bm::base_sparse_vector< Val, BV, MAX_SIZE >
• slice_octet_matrix_type : bm::str_sparse_vector< CharType, BV, STR_SIZE >
• slices() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• so1_ : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• so1_idx_ : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• so2_ : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• so2_idx_ : bm::similarity_descriptor< SO, DMD_SZ, IDX_VALUE, SValue, SFunc >
• sort() : bm::similarity_batch< SDESCR >
• sort_input_blocks_and() : bm::aggregator< BV >
• sort_input_blocks_or() : bm::aggregator< BV >
• SortCounting_JobFunctor() : SortCounting_JobFunctor< BV >
• sorted_ : bm::bvector< Alloc >::bulk_insert_iterator
• sparse_vector : bm::sparse_vector< Val, BV >::const_iterator, bm::sparse_vector< Val, BV >
• sparse_vector_bi : bm::rsc_sparse_vector< Val, SV >::back_insert_iterator
• sparse_vector_const_iterator : bm::rsc_sparse_vector< Val, SV >
• sparse_vector_deserializer : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::sparse_vector_deserializer< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• sparse_vector_scanner : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >, bm::sparse_vector_scanner< SV, S_FACTOR >
• sparse_vector_serial_layout() : bm::sparse_vector_serial_layout< SV >
• sparse_vector_serializer : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::sparse_vector_serializer< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• sparse_vector_type : bm::optimize_plan_builder< SVect, Lock >, bm::rsc_sparse_vector< Val, SV >::back_insert_iterator, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector< Val, BV >::const_iterator, bm::sv_addr_resolver< SV >, bm::sv_serialization_plan_builder< SV >, sparse_vect_index
• sparse_vector_type_ptr : bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector< Val, BV >::const_iterator
• spin_lock() : bm::spin_lock< Pad >
• sse_empty_guard() : bm::sse_empty_guard
• stage() : bm::aggregator< BV >
• start() : bm::gamma_decoder< T, TBitIO >, bm::interval_enumerator< BV >, bm::thread_pool< QValue, Lock >
• start_ : bm::chrono_taker< TOut >, bm::decoder_base
• state() : bm::serial_stream_iterator< DEC, BLOCK_IDX >
• state_ : bm::serial_stream_iterator< DEC, BLOCK_IDX >
• statistics() : bm::chrono_taker< TOut >::statistics
• statistics_type : bm::compressed_collection_deserializer< CBC >, bm::compressed_collection_serializer< CBC >, bm::serializer< BV >
• stop() : bm::chrono_taker< TOut >, bm::gamma_decoder< T, TBitIO >, bm::thread_pool< QValue, Lock >
• stop_gain : bm::xor_sim_params
• stop_mode : bm::thread_pool< QValue, Lock >
• stop_now : bm::thread_pool< QValue, Lock >
• stop_when_done : bm::thread_pool< QValue, Lock >
• stored_slices() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• str_sparse_vector : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• str_sparse_vector_type : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
• str_sparse_vector_type_ptr : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
• strand_v : data_model
• strat : bm::bvector< Alloc >::allocation_policy
• string_view_type : bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
• sub_bfind_block_cnt : bm::sparse_vector_scanner< SV, S_FACTOR >
• sub_block_l1_size : bm::sparse_vector_scanner< SV, S_FACTOR >
• sum() : bm::bitblock_sum_adapter
• sv0 : sample_data_frame
• sv_ : bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator
• sv_addr_resolver() : bm::sv_addr_resolver< SV >
• sv_g_size : bm::set2set_11_transform< SV >
• sv_octet_slices : bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• sv_ptr_ : bm::set2set_11_transform< SV >
• sv_sample_index() : bm::sv_sample_index< SV >
• sv_serialization_plan_builder() : bm::sv_serialization_plan_builder< SV >
• sv_size() : bm::sv_sample_index< SV >
• sv_size_ : bm::sparse_vector_deserializer< SV >
• sv_slices : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• sv_statistics_type : bm::optimize_plan_builder< SVect, Lock >
• sv_storage1_ : sparse_vect_index
• sv_storage_ : sparse_vect_index
• sv_value_slices : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::rsc_sparse_vector< Val, SV >
• swap() : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::bvector< Alloc >, bm::bvector_mini< A >, bm::bvmini< N >, bm::interval_enumerator< BV >, bm::miniset< A, N >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• swap_columns() : bm::basic_bmatrix< BV >
• swap_elements() : bm::base_sparse_vector< Val, BV, MAX_SIZE >
• sync() : bm::bvps_addr_resolver< BV >, bm::compressed_collection< Value, BV >, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
• sync_buffers_size() : CSequenceColl
• sync_nb_vect() : bm::xor_scanner< BV >
• sync_ro() : bm::base_sparse_vector< Val, BV, MAX_SIZE >
• sync_size() : bm::bvector< Alloc >, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >